EnhancerDB
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  3. rs530870887[chr1:3580717]
Enhancers that have rs530870887[chr1:3580717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3576945 3597855 enh11
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7)
Transcript factors that have rs530870887[chr1:3580717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3579956 3581320 TCF7L2 GTRD no Colon (HCT116) 21325205
chr1 3579956 3581320 TCF7L2 GTRD no Colon (HCT116) 107801868
chr1 3580710 3580722 HES7 JASPAR yes 26299812
chr1 3580714 3580729 TFAP2A JASPAR yes 26299813
chr1 3580714 3580729 TFAP2C JASPAR yes 26299814
chr1 3580717 3580729 TFAP2C JASPAR yes 26299815
Genes associated with rs530870887[chr1:3580717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More