EnhancerDB
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  3. rs531171841[chr1:28499976]
Enhancers that have rs531171841[chr1:28499976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
Transcript factors that have rs531171841[chr1:28499976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28499545 28500089 ZNF274 GTRD no Cervix (HeLa-S3) 107802654
chr1 28499958 28499978 RREB1 JASPAR yes 27749876
chr1 28499959 28499979 RREB1 JASPAR yes 27749878
chr1 28499962 28499982 RREB1 JASPAR yes 27749880
chr1 28499963 28499983 RREB1 JASPAR yes 27749882
chr1 28499965 28499980 FOXP1 JASPAR yes 27749883
chr1 28499965 28499986 IRF1 JASPAR yes 27749884
chr1 28499967 28499987 RREB1 JASPAR yes 27749885
chr1 28499970 28499982 IRF1 JASPAR yes 27749886
chr1 28499970 28499985 FOXP1 JASPAR yes 27749887
chr1 28499971 28499992 IRF1 JASPAR yes 27749888
chr1 28499972 28499992 RREB1 JASPAR yes 27749889
chr1 28499973 28499988 IRF9 JASPAR yes 27749890
chr1 28499975 28499987 IRF1 JASPAR yes 27749891
chr1 28499976 28499991 FOXP1 JASPAR yes 27749892
chr1 28499976 28499997 IRF1 JASPAR yes 27749893
Genes associated with rs531171841[chr1:28499976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More