EnhancerDB
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  3. rs531209088[chr1:207180662]
Enhancers that have rs531209088[chr1:207180662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207172085 207185955 enh12599
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs531209088[chr1:207180662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207180347 207180863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373149
chr1 207180504 207181108 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373150
chr1 207180538 207181068 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373151
chr1 207180568 207181024 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373152
chr1 207180591 207180953 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373153
chr1 207180597 207181101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373154
chr1 207180610 207181086 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373155
chr1 207180622 207181138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373156
chr1 207180633 207181037 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373157
chr1 207180633 207181097 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21373158
chr1 207180651 207180663 IRF1 JASPAR yes 34839289
chr1 207180660 207180681 IRF1 JASPAR yes 34839290
chr1 207180662 207180677 IRF9 JASPAR yes 34839291
Genes associated with rs531209088[chr1:207180662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More