EnhancerDB
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  3. rs531772403[chr1:116852036]
Enhancers that have rs531772403[chr1:116852036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs531772403[chr1:116852036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116851555 116852071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331950
chr1 116851743 116852073 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331952
chr1 116852012 116853003 ZNF143 GTRD no Epithelial (MCF-7) 21331954
chr1 116852021 116852042 IRF1 JASPAR yes 31792528
chr1 116852024 116852038 IRF7 JASPAR yes 31792529
chr1 116852024 116852038 IRF8 JASPAR yes 31792530
chr1 116852026 116852038 IRF1 JASPAR yes 31792531
chr1 116852033 116852045 IRF1 JASPAR yes 31792533
chr1 116852034 116852055 IRF1 JASPAR yes 31792534
Genes associated with rs531772403[chr1:116852036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More