EnhancerDB
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  3. rs532624492[chr1:17230343]
Enhancers that have rs532624492[chr1:17230343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs532624492[chr1:17230343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17228555 17230938 TCF7L2 GTRD no Colon (HCT116) 107802243
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17230324 17230345 ZNF263 JASPAR yes 27063954
chr1 17230326 17230347 ZNF263 JASPAR yes 27063956
chr1 17230327 17230348 IRF1 JASPAR yes 27063958
chr1 17230328 17230349 ZNF263 JASPAR yes 27063959
chr1 17230329 17230344 PRDM1 JASPAR yes 27063960
chr1 17230329 17230350 IRF1 JASPAR yes 27063961
chr1 17230331 17230346 PRDM1 JASPAR yes 27063962
chr1 17230333 17230354 IRF1 JASPAR yes 27063963
chr1 17230335 17230350 PRDM1 JASPAR yes 27063964
chr1 17230335 17230356 IRF1 JASPAR yes 27063965
chr1 17230337 17230358 IRF1 JASPAR yes 27063966
chr1 17230339 17230360 IRF1 JASPAR yes 27063967
chr1 17230340 17230355 FOXP1 JASPAR yes 27063968
chr1 17230340 17230361 IRF1 JASPAR yes 27063969
chr1 17230341 17230356 STAT2 JASPAR yes 27063970
chr1 17230341 17230362 IRF1 JASPAR yes 27063971
chr1 17230342 17230357 FOXP1 JASPAR yes 27063972
chr1 17230342 17230363 IRF1 JASPAR yes 27063973
Genes associated with rs532624492[chr1:17230343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More