EnhancerDB
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  3. rs532756578[chr1:42223267]
Enhancers that have rs532756578[chr1:42223267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532756578[chr1:42223267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42223247 42223267 RREB1 JASPAR yes 28418334
chr1 42223250 42223270 RREB1 JASPAR yes 28418335
chr1 42223253 42223273 RREB1 JASPAR yes 28418336
chr1 42223255 42223275 RREB1 JASPAR yes 28418337
chr1 42223262 42223274 IRF1 JASPAR yes 28418338
Genes associated with rs532756578[chr1:42223267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More