EnhancerDB
  1. Home
  2. SNP
  3. rs533109590[chr1:200400123]
Enhancers that have rs533109590[chr1:200400123]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs533109590[chr1:200400123]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 21363463
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 107855280
chr1 200399861 200400386 ZNF143 GTRD no Epithelial (MCF-7) 21363465
chr1 200400119 200400140 IRF1 JASPAR yes 34446149
chr1 200400121 200400125 YY1 TRANSFAC yes 34446150
chr1 200400121 200400136 FOXP1 JASPAR yes 34446151
Genes associated with rs533109590[chr1:200400123], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More