EnhancerDB
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  3. rs533120095[chr12:52559407]
Enhancers that have rs533120095[chr12:52559407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 52559335 52559488 vista13450
VISTA
Transcript factors that have rs533120095[chr12:52559407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52559167 52559435 TCF7L2 GTRD no Colon (HCT116) 21546574
chr12 52559167 52559435 TCF7L2 GTRD no Colon (HCT116) 108033424
chr12 52559265 52559781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546575
chr12 52559265 52559781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033425
chr12 52559294 52559584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546576
chr12 52559294 52559584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033426
chr12 52559392 52559413 ZNF263 JASPAR yes 82405930
chr12 52559392 52559413 ZNF263 JASPAR yes 120924387
chr12 52559400 52559410 MZF1 JASPAR yes 82405931
chr12 52559400 52559410 MZF1 JASPAR yes 120924388
chr12 52559403 52559409 SP1 TRANSFAC yes 82405932
chr12 52559403 52559409 SP1 TRANSFAC yes 120924389
chr12 52559403 52559413 SP1 JASPAR yes 82405933
chr12 52559403 52559413 SP1 JASPAR yes 120924390
chr12 52559404 52559425 ZNF263 JASPAR yes 82405934
chr12 52559404 52559425 ZNF263 JASPAR yes 120924391
chr12 52559407 52559422 STAT1 JASPAR yes 82405935
chr12 52559407 52559422 STAT1 JASPAR yes 120924392
chr12 52559407 52559428 ZNF263 JASPAR yes 82405936
chr12 52559407 52559428 ZNF263 JASPAR yes 120924393
Genes associated with rs533120095[chr12:52559407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More