EnhancerDB
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  3. rs533153142[chr1:29564931]
Enhancers that have rs533153142[chr1:29564931]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr1 29564766 29564995 vista1021
VISTA
Transcript factors that have rs533153142[chr1:29564931]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802678
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802679
chr1 29564926 29564937 TFAP2A JASPAR yes 27808208
chr1 29564926 29564937 TFAP2B JASPAR yes 27808209
chr1 29564926 29564937 TFAP2C JASPAR yes 27808210
chr1 29564926 29564937 TFAP2A JASPAR yes 118263943
chr1 29564926 29564937 TFAP2B JASPAR yes 118263944
chr1 29564926 29564937 TFAP2C JASPAR yes 118263945
chr1 29564927 29564936 TFAP2A JASPAR yes 27808211
chr1 29564927 29564936 TFAP2A JASPAR yes 118263946
chr1 29564931 29564941 SP1 JASPAR yes 27808212
chr1 29564931 29564941 SP1 JASPAR yes 118263947
Genes associated with rs533153142[chr1:29564931], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More