EnhancerDB
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  3. rs533354466[chr12:121258112]
Enhancers that have rs533354466[chr12:121258112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121249605 121272755 enh2641
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs533354466[chr12:121258112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121258103 121258124 IRF1 JASPAR yes 124186092
chr12 121258104 121258125 IRF1 JASPAR yes 124186093
chr12 121258106 121258127 IRF1 JASPAR yes 124186094
chr12 121258107 121258128 IRF1 JASPAR yes 124186095
chr12 121258108 121258123 FOXP1 JASPAR yes 124186096
chr12 121258108 121258129 IRF1 JASPAR yes 124186097
chr12 121258109 121258124 FOXP1 JASPAR yes 124186098
chr12 121258109 121258130 IRF1 JASPAR yes 124186099
chr12 121258110 121258125 FOXP1 JASPAR yes 124186100
chr12 121258110 121258131 IRF1 JASPAR yes 124186101
chr12 121258111 121258126 FOXP1 JASPAR yes 124186102
chr12 121258111 121258132 IRF1 JASPAR yes 124186103
chr12 121258112 121258127 FOXP1 JASPAR yes 124186104
chr12 121258112 121258133 IRF1 JASPAR yes 124186105
Genes associated with rs533354466[chr12:121258112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More