EnhancerDB
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  3. rs533356970[chr1:42125567]
Enhancers that have rs533356970[chr1:42125567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533356970[chr1:42125567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42125560 42125573 NFKB2 JASPAR yes 28406434
chr1 42125561 42125574 NFKB1 JASPAR yes 28406435
chr1 42125561 42125574 NFKB2 JASPAR yes 28406436
chr1 42125562 42125572 NFKB1 JASPAR yes 28406437
chr1 42125562 42125572 RELA JASPAR yes 28406438
chr1 42125562 42125573 NFKB1 JASPAR yes 28406439
chr1 42125563 42125573 NFKB1 JASPAR yes 28406440
Genes associated with rs533356970[chr1:42125567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More