EnhancerDB
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  3. rs533549609[chr1:90327438]
Enhancers that have rs533549609[chr1:90327438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90326658 90341655 enh483
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs533549609[chr1:90327438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90327427 90327438 PHOX2A JASPAR yes 30626230
chr1 90327427 90327438 PROP1 JASPAR yes 30626231
chr1 90327436 90327443 MEIS1 JASPAR yes 30626233
chr1 90327436 90327444 MEIS2 JASPAR yes 30626234
Genes associated with rs533549609[chr1:90327438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More