-
Home
- SNP
- rs533630435[chr16:2723260]
Enhancers that have rs533630435[chr16:2723260]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
2718145 |
2727390 |
enh3846 |
|
|
Transcript factors that have rs533630435[chr16:2723260]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
2722231
|
2723392
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684975
|
|
|
chr16
|
2722581
|
2723447
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684978
|
|
|
chr16
|
2723006
|
2723494
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684979
|
|
|
chr16
|
2723081
|
2723605
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21684980
|
|
|
chr16
|
2723236
|
2723441
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21684981
|
|
|
chr16
|
2723244
|
2723265
|
REST
|
JASPAR
|
yes
|
|
9186950
|
|
|
chr16
|
2723258
|
2723263
|
SP1
|
TRANSFAC
|
yes
|
|
9186951
|
|
|
chr16
|
2723258
|
2723264
|
SP1
|
TRANSFAC
|
yes
|
|
9186952
|
|
|
chr16
|
2723259
|
2723276
|
PAX9
|
JASPAR
|
yes
|
|
9186953
|
|
|
chr16
|
2723260
|
2723279
|
PAX5
|
JASPAR
|
yes
|
|
9186954
|
|
Genes associated with rs533630435[chr16:2723260], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |