EnhancerDB
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  3. rs533755078[chr1:42219373]
Enhancers that have rs533755078[chr1:42219373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533755078[chr1:42219373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42219358 42219373 FOXP1 JASPAR yes 28417776
chr1 42219358 42219373 HNF1A JASPAR yes 28417777
chr1 42219359 42219373 POU4F1 JASPAR yes 28417778
chr1 42219359 42219374 FOXA1 JASPAR yes 28417779
chr1 42219359 42219375 POU4F2 JASPAR yes 28417780
chr1 42219359 42219375 POU4F3 JASPAR yes 28417781
chr1 42219361 42219373 FOXI1 JASPAR yes 28417786
chr1 42219362 42219376 ONECUT2 JASPAR yes 28417787
chr1 42219362 42219376 ONECUT3 JASPAR yes 28417788
chr1 42219362 42219377 FOXP1 JASPAR yes 28417789
chr1 42219362 42219377 HNF1A JASPAR yes 28417790
chr1 42219363 42219377 POU4F1 JASPAR yes 28417791
chr1 42219363 42219378 FOXA1 JASPAR yes 28417792
chr1 42219363 42219379 POU4F2 JASPAR yes 28417793
chr1 42219363 42219379 POU4F3 JASPAR yes 28417794
chr1 42219364 42219375 FOXB1 JASPAR yes 28417795
chr1 42219364 42219375 FOXC1 JASPAR yes 28417796
chr1 42219364 42219375 PROP1 JASPAR yes 28417797
chr1 42219364 42219376 FOXC2 JASPAR yes 28417798
chr1 42219365 42219377 FOXI1 JASPAR yes 28417799
chr1 42219366 42219380 ONECUT2 JASPAR yes 28417800
chr1 42219366 42219380 ONECUT3 JASPAR yes 28417801
chr1 42219366 42219381 FOXP1 JASPAR yes 28417802
chr1 42219366 42219381 HNF1A JASPAR yes 28417803
chr1 42219367 42219381 POU4F1 JASPAR yes 28417804
chr1 42219367 42219382 FOXA1 JASPAR yes 28417805
chr1 42219367 42219383 POU4F3 JASPAR yes 28417806
chr1 42219368 42219379 FOXB1 JASPAR yes 28417807
chr1 42219368 42219379 FOXC1 JASPAR yes 28417808
chr1 42219368 42219379 PROP1 JASPAR yes 28417809
chr1 42219368 42219380 FOXC2 JASPAR yes 28417810
chr1 42219369 42219381 FOXI1 JASPAR yes 28417811
chr1 42219372 42219387 MEF2C JASPAR yes 28417812
chr1 42219373 42219388 MEF2A JASPAR yes 28417813
chr1 42219373 42219394 IRF1 JASPAR yes 28417814
Genes associated with rs533755078[chr1:42219373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More