EnhancerDB
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  3. rs533762812[chr4:2560043]
Enhancers that have rs533762812[chr4:2560043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 2559342 2563492 enh71067
Neural Stem Cells (H9)
Transcript factors that have rs533762812[chr4:2560043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 2560036 2560049 DUXA JASPAR yes 87860853
chr4 2560037 2560048 PHOX2A JASPAR yes 87860854
chr4 2560037 2560048 PROP1 JASPAR yes 87860855
chr4 2560040 2560050 ALX3 JASPAR yes 87860856
chr4 2560040 2560050 EMX1 JASPAR yes 87860857
chr4 2560040 2560050 EMX2 JASPAR yes 87860858
chr4 2560040 2560050 EVX1 JASPAR yes 87860859
chr4 2560040 2560050 EVX2 JASPAR yes 87860860
chr4 2560040 2560050 GBX2 JASPAR yes 87860861
chr4 2560040 2560050 GSX1 JASPAR yes 87860862
chr4 2560040 2560050 GSX2 JASPAR yes 87860863
chr4 2560040 2560050 HOXB2 JASPAR yes 87860864
chr4 2560040 2560050 HOXB3 JASPAR yes 87860865
chr4 2560040 2560050 LHX6 JASPAR yes 87860866
chr4 2560040 2560050 MEOX2 JASPAR yes 87860867
chr4 2560040 2560050 MNX1 JASPAR yes 87860868
chr4 2560041 2560049 DLX6 JASPAR yes 87860869
chr4 2560041 2560049 EN1 JASPAR yes 87860870
chr4 2560041 2560049 LBX1 JASPAR yes 87860871
chr4 2560041 2560049 PAX4 JASPAR yes 87860872
chr4 2560041 2560049 PDX1 JASPAR yes 87860873
chr4 2560041 2560049 VAX1 JASPAR yes 87860874
chr4 2560041 2560049 VAX2 JASPAR yes 87860875
chr4 2560041 2560049 VSX1 JASPAR yes 87860876
chr4 2560041 2560049 VSX2 JASPAR yes 87860877
chr4 2560042 2560053 PHOX2A JASPAR yes 87860878
Genes associated with rs533762812[chr4:2560043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More