EnhancerDB
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  3. rs533830580[chr17:78578728]
Enhancers that have rs533830580[chr17:78578728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78568992 78597075 enh4631
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs533830580[chr17:78578728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78578713 78578734 IRF1 JASPAR yes 56257409
chr17 78578719 78578734 FOXP1 JASPAR yes 56257410
chr17 78578720 78578741 IRF1 JASPAR yes 56257411
chr17 78578723 78578737 SPIC JASPAR yes 56257412
Genes associated with rs533830580[chr17:78578728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More