EnhancerDB
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  3. rs533888208[chr1:200305500]
Enhancers that have rs533888208[chr1:200305500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs533888208[chr1:200305500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200305429 200305959 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363089
chr1 200305450 200305926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363090
chr1 200305488 200305509 REST JASPAR yes 34436153
chr1 200305497 200305511 STAT1 JASPAR yes 34436154
chr1 200305497 200305512 AR JASPAR yes 34436155
chr1 200305497 200305512 STAT2 JASPAR yes 34436156
Genes associated with rs533888208[chr1:200305500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More