EnhancerDB
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  3. rs533973409[chr9:33229560]
Enhancers that have rs533973409[chr9:33229560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 33220097 33237177 enh25535
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr9 33229414 33229715 vista61809
VISTA
Transcript factors that have rs533973409[chr9:33229560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 33229259 33229695 CTCF UCSC Txn Factor no Conserved 108550214
chr9 33229328 33229742 TFAP2C UCSC Txn Factor no Conserved 108550215
chr9 33229329 33229934 E2F1 UCSC Txn Factor no Conserved 108550216
chr9 33229329 33229934 E2F1 UCSC Txn Factor no Conserved 108550217
chr9 33229345 33229626 RAD21 UCSC Txn Factor no Conserved 108550218
chr9 33229345 33229724 TFAP2A UCSC Txn Factor no Conserved 108550219
chr9 33229363 33229961 TCF7L2 UCSC Txn Factor no Conserved 108550220
chr9 33229363 33229961 TCF7L2 UCSC Txn Factor no Conserved 108550221
chr9 33229386 33229772 TCF12 UCSC Txn Factor no Conserved 108550222
chr9 33229388 33229786 EP300 UCSC Txn Factor no Conserved 108550223
chr9 33229406 33229591 SMC3 UCSC Txn Factor no Conserved 108550224
chr9 33229406 33229682 ESR1 UCSC Txn Factor no Conserved 108550225
chr9 33229419 33229709 FOXA1 UCSC Txn Factor no Conserved 108550226
chr9 33229423 33229715 FOSL2 UCSC Txn Factor no Conserved 108550227
chr9 33229442 33229698 JUND UCSC Txn Factor no Conserved 108550228
chr9 33229529 33229800 CEBPB UCSC Txn Factor no Conserved 108550229
chr9 33229557 33229571 JUN JASPAR yes 83784124
chr9 33229557 33229571 JUN JASPAR yes 95345610
chr9 33229559 33229570 BATF JASPAR yes 83784125
chr9 33229559 33229570 BATF JASPAR yes 95345611
Genes associated with rs533973409[chr9:33229560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More