EnhancerDB
  1. Home
  2. SNP
  3. rs534040880[chr1:43468220]
Enhancers that have rs534040880[chr1:43468220]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs534040880[chr1:43468220]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43468216 43468230 PLAG1 JASPAR yes 28476645
Genes associated with rs534040880[chr1:43468220], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More