EnhancerDB
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  3. rs534274562[chr12:123329547]
Enhancers that have rs534274562[chr12:123329547]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123317054 123331955 enh15072
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Heart
Transcript factors that have rs534274562[chr12:123329547]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123329545 123329557 PKNOX1 JASPAR yes 124297528
chr12 123329545 123329557 PKNOX2 JASPAR yes 124297529
chr12 123329546 123329556 NHLH1 JASPAR yes 124297530
chr12 123329547 123329566 REST JASPAR yes 124297531
Genes associated with rs534274562[chr12:123329547], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More