EnhancerDB
  1. Home
  2. SNP
  3. rs534312543[chr3:124321599]
Enhancers that have rs534312543[chr3:124321599]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124309245 124355975 enh20876
Bone Marrow (K562) Liver Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs534312543[chr3:124321599]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124321583 124321599 RFX2 JASPAR yes 5387707
chr3 124321583 124321599 RFX3 JASPAR yes 5387708
chr3 124321583 124321599 RFX4 JASPAR yes 5387709
chr3 124321583 124321599 RFX5 JASPAR yes 5387710
chr3 124321584 124321603 RFX2 JASPAR yes 5387711
chr3 124321598 124321613 SCRT1 JASPAR yes 5387714
Genes associated with rs534312543[chr3:124321599], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More