EnhancerDB
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  3. rs534352686[chr1:42082431]
Enhancers that have rs534352686[chr1:42082431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs534352686[chr1:42082431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42082424 42082436 IRF1 JASPAR yes 28401693
chr1 42082424 42082438 IRF7 JASPAR yes 28401694
chr1 42082426 42082432 TCF4 TRANSFAC yes 28401695
chr1 42082426 42082441 FOXP1 JASPAR yes 28401696
chr1 42082427 42082439 FOXC2 JASPAR yes 28401697
chr1 42082431 42082449 SRF JASPAR yes 28401698
Genes associated with rs534352686[chr1:42082431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More