EnhancerDB
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  3. rs534356169[chr6:42103866]
Enhancers that have rs534356169[chr6:42103866]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42097349 42109195 enh9110
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Brain (SK-N-MC) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs534356169[chr6:42103866]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42103851 42103866 MEF2C JASPAR yes 101695215
chr6 42103852 42103867 MEF2A JASPAR yes 101695217
chr6 42103858 42103869 CDX2 JASPAR yes 101695222
chr6 42103858 42103873 FOXP1 JASPAR yes 101695223
chr6 42103859 42103870 HOXA10 JASPAR yes 101695224
chr6 42103860 42103869 CDX1 JASPAR yes 101695225
chr6 42103860 42103870 HOXA13 JASPAR yes 101695226
chr6 42103860 42103870 HOXB13 JASPAR yes 101695227
chr6 42103860 42103870 HOXD13 JASPAR yes 101695228
chr6 42103860 42103875 FOXP1 JASPAR yes 101695229
chr6 42103860 42103875 MEF2C JASPAR yes 101695230
chr6 42103860 42103881 IRF1 JASPAR yes 101695231
chr6 42103864 42103870 TBP TRANSFAC yes 101695232
chr6 42103865 42103880 FOXP1 JASPAR yes 101695233
chr6 42103865 42103886 IRF1 JASPAR yes 101695234
chr6 42103866 42103887 IRF1 JASPAR yes 101695235
Genes associated with rs534356169[chr6:42103866], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More