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- rs534358939[chr17:79362054]
Enhancers that have rs534358939[chr17:79362054]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
79357485 |
79363889 |
enh17443 |
|
|
Transcript factors that have rs534358939[chr17:79362054]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
79361988
|
79363385
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797928
|
|
|
chr17
|
79361988
|
79363385
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108309249
|
|
|
chr17
|
79362000
|
79363949
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21797929
|
|
|
chr17
|
79362000
|
79363949
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108309250
|
|
|
chr17
|
79362043
|
79362058
|
TFAP2C
|
JASPAR
|
yes
|
|
56323106
|
|
|
chr17
|
79362046
|
79362057
|
TFAP2A
|
JASPAR
|
yes
|
|
56323108
|
|
|
chr17
|
79362046
|
79362057
|
TFAP2B
|
JASPAR
|
yes
|
|
56323109
|
|
|
chr17
|
79362046
|
79362057
|
TFAP2C
|
JASPAR
|
yes
|
|
56323110
|
|
|
chr17
|
79362048
|
79362059
|
NRF1
|
JASPAR
|
yes
|
|
56323111
|
|
|
chr17
|
79362051
|
79362069
|
ESR2
|
JASPAR
|
yes
|
|
56323112
|
|
|
chr17
|
79362053
|
79362064
|
NRF1
|
JASPAR
|
yes
|
|
56323113
|
|
Genes associated with rs534358939[chr17:79362054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |