EnhancerDB
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  3. rs534422224[chr17:38400120]
Enhancers that have rs534422224[chr17:38400120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38396950 38410272 enh17139
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Uterus
Transcript factors that have rs534422224[chr17:38400120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38400109 38400124 FOXP1 JASPAR yes 54201155
chr17 38400112 38400122 HOXA13 JASPAR yes 54201156
chr17 38400112 38400122 HOXB13 JASPAR yes 54201157
chr17 38400112 38400122 HOXC10 JASPAR yes 54201158
chr17 38400112 38400122 HOXD13 JASPAR yes 54201159
chr17 38400112 38400123 HOXA10 JASPAR yes 54201160
chr17 38400113 38400122 CDX1 JASPAR yes 54201161
chr17 38400113 38400123 MNX1 JASPAR yes 54201162
chr17 38400113 38400124 CDX2 JASPAR yes 54201163
chr17 38400116 38400131 SCRT1 JASPAR yes 54201164
chr17 38400118 38400131 SCRT2 JASPAR yes 54201165
Genes associated with rs534422224[chr17:38400120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More