EnhancerDB
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  3. rs534449806[chr1:200502249]
Enhancers that have rs534449806[chr1:200502249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200491362 200502415 enh27419
Brain (SK-N-MC) Blood (T-cell) Astrocyte Pancreas Neural Stem Cells (H9) Thymus
chr1 200502246 200502265 vista4517
VISTA
Transcript factors that have rs534449806[chr1:200502249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200502238 200502251 HSF1 JASPAR yes 34458018
chr1 200502238 200502251 HSF4 JASPAR yes 34458019
chr1 200502238 200502251 HSF1 JASPAR yes 118430145
chr1 200502238 200502251 HSF4 JASPAR yes 118430146
chr1 200502245 200502260 FOXP1 JASPAR yes 34458020
chr1 200502245 200502260 FOXP1 JASPAR yes 118430147
chr1 200502246 200502261 FOXP1 JASPAR yes 34458021
chr1 200502246 200502261 FOXP1 JASPAR yes 118430148
chr1 200502247 200502262 FOXP1 JASPAR yes 34458022
chr1 200502247 200502262 FOXP1 JASPAR yes 118430149
chr1 200502247 200502268 IRF1 JASPAR yes 34458023
chr1 200502247 200502268 IRF1 JASPAR yes 118430150
chr1 200502248 200502263 FOXP1 JASPAR yes 34458024
chr1 200502248 200502263 FOXP1 JASPAR yes 118430151
chr1 200502248 200502269 IRF1 JASPAR yes 34458025
chr1 200502248 200502269 IRF1 JASPAR yes 118430152
chr1 200502249 200502264 FOXP1 JASPAR yes 34458026
chr1 200502249 200502264 FOXP1 JASPAR yes 118430153
chr1 200502249 200502270 IRF1 JASPAR yes 34458027
chr1 200502249 200502270 IRF1 JASPAR yes 118430154
Genes associated with rs534449806[chr1:200502249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More