EnhancerDB
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  3. rs534506397[chr17:77897912]
Enhancers that have rs534506397[chr17:77897912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs534506397[chr17:77897912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77897103 77897971 TCF7L2 GTRD no Colon (HCT116) 21796688
chr17 77897570 77897992 TCF7L2 GTRD no Colon (HCT116) 21796689
chr17 77897814 77898318 ZNF274 GTRD no Blood (GM12878) 21796690
chr17 77897911 77897921 SMAD3 JASPAR yes 56229533
Genes associated with rs534506397[chr17:77897912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More