EnhancerDB
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  3. rs534789345[chr19:3175506]
Enhancers that have rs534789345[chr19:3175506]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3170105 3178875 enh17860
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs534789345[chr19:3175506]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3175502 3175512 ID4 JASPAR yes 112115175
chr19 3175502 3175512 MSC JASPAR yes 112115176
chr19 3175502 3175512 TCF3 JASPAR yes 112115177
chr19 3175503 3175512 SNAI2 JASPAR yes 112115178
chr19 3175504 3175509 USF2 TRANSFAC yes 112115179
Genes associated with rs534789345[chr19:3175506], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More