EnhancerDB
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  3. rs534793627[chr6:88843059]
Enhancers that have rs534793627[chr6:88843059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88836172 88847864 enh23406
Placenta Neural Stem Cells (H9) Blood (OCI-LY7)
Transcript factors that have rs534793627[chr6:88843059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88843049 88843059 ALX3 JASPAR yes 103351060
chr6 88843049 88843059 EMX1 JASPAR yes 103351061
chr6 88843049 88843059 EMX2 JASPAR yes 103351062
chr6 88843049 88843059 EN2 JASPAR yes 103351063
chr6 88843049 88843059 EVX1 JASPAR yes 103351064
chr6 88843049 88843059 EVX2 JASPAR yes 103351065
chr6 88843049 88843059 GBX1 JASPAR yes 103351066
chr6 88843049 88843059 GBX2 JASPAR yes 103351067
chr6 88843049 88843059 GSX1 JASPAR yes 103351068
chr6 88843049 88843059 HOXA2 JASPAR yes 103351069
chr6 88843049 88843059 HOXB2 JASPAR yes 103351070
chr6 88843049 88843059 HOXB3 JASPAR yes 103351071
chr6 88843049 88843059 LBX2 JASPAR yes 103351072
chr6 88843049 88843059 LHX2 JASPAR yes 103351073
chr6 88843049 88843059 LHX6 JASPAR yes 103351074
chr6 88843049 88843059 MIXL1 JASPAR yes 103351075
chr6 88843049 88843059 NOTO JASPAR yes 103351076
chr6 88843049 88843059 POU6F1 JASPAR yes 103351077
chr6 88843050 88843060 POU6F2 JASPAR yes 103351092
chr6 88843050 88843063 DUXA JASPAR yes 103351093
chr6 88843051 88843062 DUX4 JASPAR yes 103351094
chr6 88843051 88843062 PHOX2A JASPAR yes 103351095
chr6 88843051 88843062 PROP1 JASPAR yes 103351096
Genes associated with rs534793627[chr6:88843059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More