EnhancerDB
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  3. rs534804580[chr1:178648300]
Enhancers that have rs534804580[chr1:178648300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs534804580[chr1:178648300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178648294 178648303 SP1 TRANSFAC yes 33437431
chr1 178648295 178648301 SP1 TRANSFAC yes 33437432
chr1 178648295 178648305 SP1 JASPAR yes 33437433
chr1 178648296 178648303 SP1 TRANSFAC yes 33437434
chr1 178648297 178648302 SP1 TRANSFAC yes 33437435
chr1 178648297 178648303 SP1 TRANSFAC yes 33437436
Genes associated with rs534804580[chr1:178648300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More