EnhancerDB
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  3. rs534811643[chr5:90562431]
Enhancers that have rs534811643[chr5:90562431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90560003 90595415 enh22426
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs534811643[chr5:90562431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90562428 90562448 RREB1 JASPAR yes 64183884
chr5 90562429 90562450 IRF1 JASPAR yes 64183885
chr5 90562430 90562436 LEF1 TRANSFAC yes 64183886
chr5 90562430 90562436 SOX10 JASPAR yes 64183887
chr5 90562430 90562445 FOXP1 JASPAR yes 64183888
Genes associated with rs534811643[chr5:90562431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More