EnhancerDB
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  3. rs534865989[chr1:204476884]
Enhancers that have rs534865989[chr1:204476884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204466245 204479448 enh886
Cervix (HeLa-S3) Prostate (RWPE1) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Kidney
chr1 204476628 204477018 vista4697
VISTA
Transcript factors that have rs534865989[chr1:204476884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204475006 204481105 ZNF143 GTRD no Epithelial (MCF-7) 107860483
chr1 204475568 204476888 ZNF274 GTRD no Bone Marrow (K562) 107860484
chr1 204475601 204476937 ZNF143 GTRD no Epithelial (MCF-7) 107860485
chr1 204476031 204477397 POLR2A UCSC Txn Factor no Conserved 107860486
chr1 204476155 204477127 ZNF143 GTRD no Epithelial (MCF-7) 107860487
chr1 204476244 204477090 ZNF143 GTRD no Epithelial (MCF-7) 107860488
chr1 204476256 204476907 ZNF143 GTRD no Epithelial (MCF-7) 107860489
chr1 204476267 204477315 ZBTB33 GTRD no Lung (A549) 107860490
chr1 204476318 204477096 ZNF274 GTRD no Cervix (HeLa-S3) 21370687
chr1 204476318 204477096 ZNF274 GTRD no Cervix (HeLa-S3) 107860491
chr1 204476321 204477336 ZNF274 GTRD no Bone Marrow (K562) 107860492
chr1 204476355 204477188 ZNF274 GTRD no Bone Marrow (K562) 107860493
chr1 204476414 204477228 ZBTB33 GTRD no Lung (A549) 107860494
chr1 204476422 204477055 ZBTB33 GTRD no Lung (A549) 107860495
chr1 204476422 204477055 ZNF274 GTRD no Bone Marrow (K562) 107860496
chr1 204476434 204476964 ZBTB33 GTRD no Lung (A549) 107860497
chr1 204476472 204477127 ZNF143 GTRD no Epithelial (MCF-7) 107860498
chr1 204476481 204476958 ZNF274 GTRD no Blood (GM12878) 107860499
chr1 204476499 204477031 ZNF274 GTRD no Bone Marrow (K562) 107860500
chr1 204476504 204476986 ZNF274 GTRD no Blood (GM12878) 107860501
chr1 204476510 204477040 ZNF274 GTRD no Bone Marrow (K562) 107860502
chr1 204476519 204476989 ZNF274 GTRD no Liver (HepG2) 107860503
chr1 204476530 204476923 ZBTB33 GTRD no Lung (A549) 107860504
chr1 204476538 204476887 ZNF274 GTRD no Bone Marrow (K562) 107860505
chr1 204476553 204476996 ZNF274 GTRD no Liver (HepG2) 107860506
chr1 204476554 204476922 ZNF274 GTRD no Cervix (HeLa-S3) 21370688
chr1 204476554 204476922 ZNF274 GTRD no Cervix (HeLa-S3) 107860507
chr1 204476555 204476957 ZNF274 GTRD no Bone Marrow (K562) 107860508
chr1 204476556 204476897 ZNF274 GTRD no Blood (GM12878) 107860509
chr1 204476556 204476929 ZNF274 GTRD no Bone Marrow (K562) 107860510
chr1 204476563 204477033 ZBTB33 GTRD no Lung (A549) 107860511
chr1 204476569 204476973 ZNF274 GTRD no Bone Marrow (K562) 107860512
chr1 204476573 204476935 ZNF274 GTRD no Blood (GM12878) 107860513
chr1 204476578 204476961 ZNF274 GTRD no Cervix (HeLa-S3) 21370689
chr1 204476578 204476961 ZNF274 GTRD no Cervix (HeLa-S3) 107860514
chr1 204476586 204477108 ZNF143 GTRD no Epithelial (MCF-7) 107860515
chr1 204476597 204477090 ZNF274 GTRD no Liver (HepG2) 107860516
chr1 204476608 204476886 ZNF274 GTRD no Liver (HepG2) 107860517
chr1 204476615 204476953 ZNF143 GTRD no Epithelial (MCF-7) 107860518
chr1 204476644 204477000 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107860520
chr1 204476719 204476997 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370690
chr1 204476719 204476997 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860521
chr1 204476724 204477228 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370691
chr1 204476724 204477228 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860522
chr1 204476732 204477035 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107860523
chr1 204476739 204477077 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107860524
chr1 204476743 204477139 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370692
chr1 204476743 204477139 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860525
chr1 204476744 204477104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107860526
chr1 204476766 204477142 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107860527
chr1 204476774 204477130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370693
chr1 204476774 204477130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860528
chr1 204476774 204477350 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107860529
chr1 204476787 204476955 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107860530
chr1 204476804 204477260 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370694
chr1 204476804 204477260 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860531
chr1 204476806 204477242 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107860532
chr1 204476816 204477440 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107860533
chr1 204476829 204477093 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370695
chr1 204476829 204477093 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860534
chr1 204476853 204477183 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370696
chr1 204476853 204477183 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107860535
chr1 204476856 204477176 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107860536
chr1 204476873 204477249 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21370697
chr1 204476873 204477249 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107860537
chr1 204476879 204476895 ZNF143 JASPAR yes 34707922
chr1 204476879 204476895 ZNF143 JASPAR yes 118438645
chr1 204476879 204477159 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107860538
chr1 204476884 204476894 SP1 JASPAR yes 34707923
chr1 204476884 204476894 SP1 JASPAR yes 118438646
Genes associated with rs534865989[chr1:204476884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More