EnhancerDB
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  3. rs534918351[chr5:172192527]
Enhancers that have rs534918351[chr5:172192527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
chr5 172192263 172193766 vista50162
VISTA
Transcript factors that have rs534918351[chr5:172192527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172192304 172192884 ATF2 UCSC Txn Factor no Conserved 108537473
chr5 172192327 172192647 MAFK UCSC Txn Factor no Conserved 108537474
chr5 172192345 172192665 GABPA UCSC Txn Factor no Conserved 108537475
chr5 172192388 172193203 RCOR1 UCSC Txn Factor no Conserved 108537476
chr5 172192410 172192757 JUND UCSC Txn Factor no Conserved 108537477
chr5 172192515 172192534 RFX2 JASPAR yes 67824188
chr5 172192515 172192534 RFX2 JASPAR yes 70762450
chr5 172192519 172192535 RFX2 JASPAR yes 67824189
chr5 172192519 172192535 RFX3 JASPAR yes 67824190
chr5 172192519 172192535 RFX4 JASPAR yes 67824191
chr5 172192519 172192535 RFX5 JASPAR yes 67824192
chr5 172192519 172192535 RFX2 JASPAR yes 70762451
chr5 172192519 172192535 RFX3 JASPAR yes 70762452
chr5 172192519 172192535 RFX4 JASPAR yes 70762453
chr5 172192519 172192535 RFX5 JASPAR yes 70762454
chr5 172192520 172192534 EBF1 JASPAR yes 67824193
chr5 172192520 172192534 EBF1 JASPAR yes 70762455
chr5 172192527 172192532 TFAP2A TRANSFAC yes 67824194
chr5 172192527 172192532 TFAP2A TRANSFAC yes 70762456
chr5 172192527 172192533 MZF1 JASPAR yes 67824195
chr5 172192527 172192533 MZF1 JASPAR yes 70762457
Genes associated with rs534918351[chr5:172192527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More