EnhancerDB
  1. Home
  2. SNP
  3. rs535116656[chr12:52560955]
Enhancers that have rs535116656[chr12:52560955]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52554925 52561655 enh14725
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs535116656[chr12:52560955]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52560937 52560958 IRF1 JASPAR yes 120924596
chr12 52560939 52560960 IRF1 JASPAR yes 120924598
chr12 52560946 52560961 MEF2C JASPAR yes 120924600
Genes associated with rs535116656[chr12:52560955], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More