EnhancerDB
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  3. rs535218553[chr1:116866216]
Enhancers that have rs535218553[chr1:116866216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs535218553[chr1:116866216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116866131 116866280 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332167
chr1 116866161 116866260 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21332168
chr1 116866208 116866223 FOXA1 JASPAR yes 31794791
chr1 116866209 116866224 FOXP1 JASPAR yes 31794792
chr1 116866210 116866221 FOXP2 JASPAR yes 31794793
chr1 116866210 116866224 FOXF2 JASPAR yes 31794794
chr1 116866211 116866219 FOXD1 JASPAR yes 31794795
chr1 116866211 116866219 FOXO3 JASPAR yes 31794796
chr1 116866212 116866219 FOXD2 JASPAR yes 31794797
chr1 116866212 116866219 FOXI1 JASPAR yes 31794798
chr1 116866212 116866219 FOXL1 JASPAR yes 31794799
chr1 116866212 116866219 FOXO4 JASPAR yes 31794800
chr1 116866212 116866219 FOXO6 JASPAR yes 31794801
chr1 116866212 116866219 FOXP3 JASPAR yes 31794802
chr1 116866212 116866223 FOXA1 JASPAR yes 31794803
Genes associated with rs535218553[chr1:116866216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More