-
Home
- SNP
- rs535227159[chr13:113928342]
Enhancers that have rs535227159[chr13:113928342]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr13 |
113925325 |
113932010 |
enh3023 |
|
|
| chr13 |
113928164 |
113928348 |
vista17149 |
|
|
Transcript factors that have rs535227159[chr13:113928342]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr13
|
113926132
|
113928675
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
21605859
|
|
|
chr13
|
113926132
|
113928675
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
108091045
|
|
|
chr13
|
113926132
|
113928675
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
108091046
|
|
|
chr13
|
113926132
|
113928675
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
108091047
|
|
|
chr13
|
113927710
|
113928384
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
21605862
|
|
|
chr13
|
113927710
|
113928384
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108091051
|
|
|
chr13
|
113927851
|
113928476
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108091053
|
|
|
chr13
|
113928051
|
113928673
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108091054
|
|
|
chr13
|
113928051
|
113928673
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108091055
|
|
|
chr13
|
113928297
|
113929514
|
MYOD
|
GTRD
|
no
|
Muscle (Myoblast)
|
108091056
|
|
|
chr13
|
113928297
|
113929514
|
MYOD
|
GTRD
|
no
|
Muscle (Myoblast)
|
108091057
|
|
|
chr13
|
113928321
|
113929214
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091058
|
|
|
chr13
|
113928321
|
113929214
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091059
|
|
|
chr13
|
113928327
|
113929225
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091060
|
|
|
chr13
|
113928327
|
113929225
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091061
|
|
|
chr13
|
113928335
|
113929251
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091062
|
|
|
chr13
|
113928335
|
113929251
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091063
|
|
|
chr13
|
113928337
|
113928345
|
SP1
|
TRANSFAC
|
yes
|
|
19347639
|
|
|
chr13
|
113928337
|
113928345
|
SP1
|
TRANSFAC
|
yes
|
|
60452964
|
|
|
chr13
|
113928340
|
113931238
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091064
|
|
|
chr13
|
113928340
|
113931238
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091065
|
|
|
chr13
|
113928341
|
113929302
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091066
|
|
|
chr13
|
113928341
|
113929302
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108091067
|
|
Genes associated with rs535227159[chr13:113928342], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |