EnhancerDB
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  3. rs535828990[chr1:222143245]
Enhancers that have rs535828990[chr1:222143245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs535828990[chr1:222143245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222143234 222143245 TBX2 JASPAR yes 35587198
chr1 222143245 222143262 PAX1 JASPAR yes 35587199
Genes associated with rs535828990[chr1:222143245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More