EnhancerDB
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  3. rs537223274[chr1:42241399]
Enhancers that have rs537223274[chr1:42241399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs537223274[chr1:42241399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42241392 42241402 TFEC JASPAR yes 28421154
chr1 42241392 42241403 USF2 JASPAR yes 28421155
chr1 42241393 42241403 MAX JASPAR yes 28421156
chr1 42241399 42241403 H4TF2 TRANSFAC yes 28421157
Genes associated with rs537223274[chr1:42241399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More