EnhancerDB
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  3. rs537946004[chr1:173420743]
Enhancers that have rs537946004[chr1:173420743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173419185 173426575 enh61930
Cervix (HeLa-S3) Esophagus Stomach Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs537946004[chr1:173420743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173419393 173421006 ZNF274 GTRD no Cervix (HeLa-S3) 21351765
chr1 173419741 173420983 ZNF143 GTRD no Epithelial (MCF-7) 21351766
chr1 173419933 173421085 ZNF143 GTRD no Epithelial (MCF-7) 21351767
chr1 173419960 173421024 ZNF143 GTRD no Epithelial (MCF-7) 21351768
chr1 173420008 173420764 ZNF143 GTRD no Epithelial (MCF-7) 21351771
chr1 173420012 173420973 ZNF143 GTRD no Epithelial (MCF-7) 21351772
chr1 173420013 173420954 ZNF143 GTRD no Epithelial (MCF-7) 21351773
chr1 173420037 173420879 ZNF274 GTRD no Cervix (HeLa-S3) 21351774
chr1 173420056 173420952 ZNF274 GTRD no Cervix (HeLa-S3) 21351775
chr1 173420066 173420815 ZNF143 GTRD no Epithelial (MCF-7) 21351776
chr1 173420102 173420915 ZNF274 GTRD no Cervix (HeLa-S3) 21351778
chr1 173420149 173420773 ZNF143 GTRD no Epithelial (MCF-7) 21351781
chr1 173420154 173420865 ZNF143 GTRD no Epithelial (MCF-7) 21351783
chr1 173420185 173420798 ZNF143 GTRD no Epithelial (MCF-7) 21351786
chr1 173420187 173420853 ZNF274 GTRD no Cervix (HeLa-S3) 21351787
chr1 173420194 173420769 ZNF143 GTRD no Epithelial (MCF-7) 21351788
chr1 173420212 173420759 ZNF274 GTRD no Cervix (HeLa-S3) 21351792
chr1 173420264 173420762 ZNF274 GTRD no Cervix (HeLa-S3) 21351797
chr1 173420348 173420859 ZNF143 GTRD no Epithelial (MCF-7) 21351798
chr1 173420728 173420743 MEF2A JASPAR yes 33202788
chr1 173420742 173420748 LEF1 TRANSFAC yes 33202789
chr1 173420742 173420748 SOX10 JASPAR yes 33202790
chr1 173420743 173420758 MEF2A JASPAR yes 33202791
Genes associated with rs537946004[chr1:173420743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More