EnhancerDB
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  3. rs538015535[chr1:206532412]
Enhancers that have rs538015535[chr1:206532412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206527667 206534455 enh58206
Skin (Keratinocyte) Colon (HCT116) Lung (PC-9)
Transcript factors that have rs538015535[chr1:206532412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206532405 206532415 HOXD13 JASPAR yes 34799560
chr1 206532405 206532416 HOXA10 JASPAR yes 34799561
chr1 206532406 206532416 ALX3 JASPAR yes 34799562
chr1 206532406 206532416 EMX1 JASPAR yes 34799563
chr1 206532406 206532416 EMX2 JASPAR yes 34799564
chr1 206532406 206532416 EVX2 JASPAR yes 34799565
chr1 206532406 206532416 GSX2 JASPAR yes 34799566
chr1 206532406 206532416 HOXB2 JASPAR yes 34799567
chr1 206532406 206532416 HOXB3 JASPAR yes 34799568
chr1 206532406 206532416 MEOX1 JASPAR yes 34799569
chr1 206532406 206532416 MEOX2 JASPAR yes 34799570
chr1 206532406 206532416 MIXL1 JASPAR yes 34799571
chr1 206532406 206532416 MNX1 JASPAR yes 34799572
chr1 206532406 206532416 RAX JASPAR yes 34799573
chr1 206532407 206532415 LMX1A JASPAR yes 34799574
chr1 206532407 206532415 LMX1B JASPAR yes 34799575
chr1 206532407 206532415 NKX6-1 JASPAR yes 34799576
chr1 206532407 206532415 NKX6-2 JASPAR yes 34799577
chr1 206532407 206532415 PDX1 JASPAR yes 34799578
chr1 206532407 206532415 VAX1 JASPAR yes 34799579
chr1 206532407 206532415 VAX2 JASPAR yes 34799580
chr1 206532407 206532415 VSX1 JASPAR yes 34799581
chr1 206532407 206532417 POU6F2 JASPAR yes 34799582
Genes associated with rs538015535[chr1:206532412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More