EnhancerDB
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  3. rs538060756[chr1:117052378]
Enhancers that have rs538060756[chr1:117052378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538060756[chr1:117052378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117050918 117052386 ZNF274 GTRD no Blood (GM12878) 21333329
chr1 117050918 117052386 ZNF274 GTRD no Blood (GM12878) 107824468
chr1 117050918 117052386 ZNF274 GTRD no Blood (GM12878) 107824469
chr1 117051096 117052416 ZNF274 GTRD no Blood (GM12878) 21333336
chr1 117051096 117052416 ZNF274 GTRD no Blood (GM12878) 107824481
chr1 117051096 117052416 ZNF274 GTRD no Blood (GM12878) 107824482
chr1 117051788 117052438 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333388
chr1 117051788 117052438 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824536
chr1 117051874 117052438 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333391
chr1 117051874 117052438 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824539
chr1 117051893 117052423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333392
chr1 117051893 117052423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824540
chr1 117051896 117052412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333393
chr1 117051896 117052412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824541
chr1 117052154 117052494 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333395
chr1 117052369 117052381 TEAD1 JASPAR yes 31815761
Genes associated with rs538060756[chr1:117052378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More