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- rs538336689[chr1:228271652]
Enhancers that have rs538336689[chr1:228271652]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
228267485 |
228277903 |
enh89543 |
|
|
Transcript factors that have rs538336689[chr1:228271652]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
228269188
|
228272435
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107876843
|
|
|
chr1
|
228271583
|
228272248
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876844
|
|
|
chr1
|
228271616
|
228272816
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876845
|
|
|
chr1
|
228271639
|
228271659
|
RREB1
|
JASPAR
|
yes
|
|
35899937
|
|
|
chr1
|
228271651
|
228271671
|
PPARG
|
JASPAR
|
yes
|
|
35899938
|
|
Genes associated with rs538336689[chr1:228271652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |