EnhancerDB
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  3. rs538619558[chr12:120449840]
Enhancers that have rs538619558[chr12:120449840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120442165 120460015 enh2631
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Blood (GM12878) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs538619558[chr12:120449840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120449742 120450338 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21578184
chr12 120449742 120450338 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108062592
chr12 120449781 120450357 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108062593
chr12 120449834 120449840 GATA3 JASPAR yes 124144751
chr12 120449840 120449851 USF2 JASPAR yes 124144752
Genes associated with rs538619558[chr12:120449840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More