EnhancerDB
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  3. rs538806[chr1:28396676]
Enhancers that have rs538806[chr1:28396676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs538806[chr1:28396676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28396668 28396688 RREB1 JASPAR yes 27736887
chr1 28396671 28396677 TCF4 TRANSFAC yes 27736888
chr1 28396671 28396686 FOXP1 JASPAR yes 27736889
chr1 28396672 28396684 FOXC2 JASPAR yes 27736890
chr1 28396674 28396685 FOXA1 JASPAR yes 27736891
Genes associated with rs538806[chr1:28396676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More