EnhancerDB
  1. Home
  2. SNP
  3. rs538843214[chr19:10353886]
Enhancers that have rs538843214[chr19:10353886]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs538843214[chr19:10353886]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 21848622
chr19 10352200 10354827 TCF7L2 GTRD no Colon (HCT116) 108383131
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 21848625
chr19 10352289 10354784 TCF7L2 GTRD no Colon (HCT116) 108383134
chr19 10352291 10354422 ZNF143 GTRD no Epithelial (MCF-7) 21848626
chr19 10352291 10354422 ZNF143 GTRD no Epithelial (MCF-7) 108383135
chr19 10352291 10354706 TCF7L2 GTRD no Colon (HCT116) 21848627
chr19 10352291 10354706 TCF7L2 GTRD no Colon (HCT116) 108383136
chr19 10352319 10354620 TCF7L2 GTRD no Colon (HCT116) 21848628
chr19 10352319 10354620 TCF7L2 GTRD no Colon (HCT116) 108383137
chr19 10352323 10354398 ZNF143 GTRD no Epithelial (MCF-7) 21848629
chr19 10352323 10354398 ZNF143 GTRD no Epithelial (MCF-7) 108383138
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 21848630
chr19 10352326 10354808 TCF7L2 GTRD no Colon (HCT116) 108383139
chr19 10352363 10354571 TCF7L2 GTRD no Colon (HCT116) 21848631
chr19 10352363 10354571 TCF7L2 GTRD no Colon (HCT116) 108383140
chr19 10352437 10354360 ZNF274 GTRD no Blood (GM12878) 21848632
chr19 10352437 10354360 ZNF274 GTRD no Blood (GM12878) 108383141
chr19 10352763 10354518 TCF7L2 GTRD no Colon (HCT116) 21848636
chr19 10353335 10354403 ZNF274 GTRD no Blood (GM12878) 21848643
chr19 10353399 10354613 TCF7L2 GTRD no Colon (HCT116) 21848646
chr19 10353492 10354514 ZNF274 GTRD no Blood (GM12878) 21848653
chr19 10353701 10354539 ZNF143 GTRD no Epithelial (MCF-7) 21848660
chr19 10353709 10354344 ZNF274 GTRD no Blood (GM12878) 21848661
chr19 10353722 10354472 TCF7L2 GTRD no Colon (HCT116) 21848662
chr19 10353755 10354160 ZNF274 GTRD no Blood (GM12878) 21848663
chr19 10353812 10354267 ZNF274 GTRD no Blood (GM12878) 21848664
chr19 10353875 10353886 CEBPB JASPAR yes 112416611
chr19 10353886 10353900 TLX1 JASPAR yes 112416612
chr19 10353886 10353904 ESR2 JASPAR yes 112416613
Genes associated with rs538843214[chr19:10353886], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More