EnhancerDB
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  3. rs539003413[chr19:2069161]
Enhancers that have rs539003413[chr19:2069161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs539003413[chr19:2069161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2068972 2070232 ZNF274 GTRD no Bone Marrow (K562) 21834652
chr19 2069151 2069165 TLX1 JASPAR yes 112047211
chr19 2069152 2069166 TLX1 JASPAR yes 112047212
chr19 2069160 2069171 CDX2 JASPAR yes 112047213
chr19 2069161 2069172 HOXA10 JASPAR yes 112047214
Genes associated with rs539003413[chr19:2069161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More