EnhancerDB
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  3. rs539026054[chr1:3578438]
Enhancers that have rs539026054[chr1:3578438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3576945 3597855 enh11
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7)
Transcript factors that have rs539026054[chr1:3578438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3578427 3578443 SOX8 JASPAR yes 26299474
chr1 3578433 3578454 IRF1 JASPAR yes 26299475
chr1 3578436 3578440 YY1 TRANSFAC yes 26299476
chr1 3578436 3578451 FOXP1 JASPAR yes 26299477
Genes associated with rs539026054[chr1:3578438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More