EnhancerDB
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  3. rs539031662[chr1:46630088]
Enhancers that have rs539031662[chr1:46630088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46629912 46640695 enh11833
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Blood (OCI-LY7) Placenta Thyroid Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs539031662[chr1:46630088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46630077 46630088 EBF1 JASPAR yes 28650877
chr1 46630078 46630090 TFAP2A JASPAR yes 28650878
chr1 46630078 46630090 TFAP2B JASPAR yes 28650879
chr1 46630078 46630090 TFAP2C JASPAR yes 28650880
chr1 46630078 46630093 TFAP2A JASPAR yes 28650881
chr1 46630078 46630093 TFAP2C JASPAR yes 28650882
chr1 46630079 46630090 TFAP2A JASPAR yes 28650883
chr1 46630079 46630090 TFAP2B JASPAR yes 28650884
chr1 46630079 46630090 TFAP2C JASPAR yes 28650885
chr1 46630088 46630092 YY1 TRANSFAC yes 28650886
Genes associated with rs539031662[chr1:46630088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More