EnhancerDB
  1. Home
  2. SNP
  3. rs539035931[chr1:42216670]
Enhancers that have rs539035931[chr1:42216670]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539035931[chr1:42216670]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42216659 42216670 TBX2 JASPAR yes 28417332
chr1 42216659 42216672 EOMES JASPAR yes 28417333
chr1 42216660 42216670 TBR1 JASPAR yes 28417339
chr1 42216660 42216673 SMAD2 JASPAR yes 28417340
Genes associated with rs539035931[chr1:42216670], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More