EnhancerDB
  1. Home
  2. SNP
  3. rs539053798[chr1:229169072]
Enhancers that have rs539053798[chr1:229169072]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229146625 229173535 enh12758
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Placenta Breast Thyroid Pancreas Muscle (Myotube) Thymus Stomach
Transcript factors that have rs539053798[chr1:229169072]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229169059 229170263 ZNF274 GTRD no Liver (HepG2) 21389625
chr1 229169068 229169089 IRF1 JASPAR yes 35955167
chr1 229169072 229169087 PRDM1 JASPAR yes 35955168
Genes associated with rs539053798[chr1:229169072], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More